import numpy as np
import pandas as pd
import os

def calculate_conductivity(df, df_saline_median):
    conductivity_list = [976, 1987, 3850, 5650, 7450, 9238]
    conductivity_list.reverse()
    result = []
    for i in range(len(freq_list)):
        ans = df_saline_median.iloc[:, i:i+1]
        ans = ans.values.tolist()
        new_ans = sorted([ans[j][0] for j in range(len(ans))])
        result.append(np.interp(df.iloc[:, i+2:i+3].median(), new_ans, conductivity_list))
    return result

# 定义文件夹路径
folder_path = './test1/'

# 存储每个文件的结果
result_list = []

# 遍历文件夹内的所有csv文件
for file_name in os.listdir(folder_path):
    if file_name.endswith('.csv'):
        # 读取csv文件
        df = pd.read_csv(os.path.join(folder_path, file_name), encoding='utf-8')
        df = df.iloc[:, 1:18]
        df_tumor = df[df['name'] == 'tumor']
        df_peritumor = df[df['name'] == 'peritumor']
        df['name'] = df['name'] + df['property']
        # 将每个样本按照property分组
        tumor_dict = {}
        peritumor_dict = {}
        for name in ['A', 'B', 'C', 'D', 'E', 'F', 'G', 'H']:
            df_tumor_name = df_tumor[df_tumor['property'] == name]
            df_peritumor_name = df_peritumor[df_peritumor['property'] == name]
            tumor_dict[name] = df_tumor_name
            peritumor_dict[name] = df_peritumor_name

        # 计算saline的中位数
        concentration_list = ['saline0.05%', 'saline0.10%', 'saline0.20%', 'saline0.30%', 'saline0.40%', 'saline0.50%']
        df_saline_median = pd.DataFrame(columns=['1kHz_mag', '2kHz_mag', '3kHz_mag', '7kHz_mag', '11kHz_mag', '17kHz_mag',
                                                 '23kHz_mag', '31kHz_mag', '43kHz_mag', '61kHz_mag', '89kHz_mag', '127kHz_mag',
                                                 '179kHz_mag', '251kHz_mag', '349kHz_mag'])
        for i in concentration_list:
            saline_group = df[df['name'] == i]
            saline_median = saline_group[['1kHz_mag', '2kHz_mag', '3kHz_mag', '7kHz_mag', '11kHz_mag', '17kHz_mag',
                                          '23kHz_mag', '31kHz_mag', '43kHz_mag', '61kHz_mag', '89kHz_mag', '127kHz_mag',
                                          '179kHz_mag', '251kHz_mag', '349kHz_mag']].median()
            df_saline_median.loc[i] = saline_median

        # 计算每个样本的电导率并存储结果
        freq_list = [1, 2, 3, 7, 11, 17, 23, 31, 43, 61, 89, 127, 179, 251, 349]
        conductivity_list = [976, 1987, 3850, 5650, 7450, 9238]
        conductivity_list.reverse()
        tumor_results = {}
        peritumor_results = {}
        for name in ['A', 'B', 'C', 'D', 'E', 'F', 'G', 'H']:
            tumor_result = calculate_conductivity(tumor_dict[name], df_saline_median)
            tumor_results[name] = ' '.join(str(i[0]) for i in tumor_result)
            peritumor_result = calculate_conductivity(peritumor_dict[name], df_saline_median)
            peritumor_results[name] = ' '.join(str(i) for i in peritumor_result)
        result_list.append((file_name, tumor_results, peritumor_results))

# 将每个文件的结果写入相应的文件
for result in result_list:
    file_name, tumor_results, peritumor_results = result
    for name in ['A', 'B', 'C', 'D', 'E', 'F', 'G', 'H']:
        with open(os.path.join(folder_path, file_name[:-4] + f'_tumor_{name}.txt'), 'w') as f:
            f.write(tumor_results[name])
        with open(os.path.join(folder_path, file_name[:-4] + f'_peritumor_{name}.txt'), 'w') as f:
            f.write(peritumor_results[name])

代码的关键修改如下:

  1. 在代码开头添加一个空列表 result_list,用于存储每个文件的结果。
  2. 在处理每个文件时,将结果添加到 result_list 中,每个元素包含文件名、肿瘤结果和周围肿瘤结果。
  3. 在处理完所有文件后,遍历 result_list,将每个文件的结果写入相应的文件。

这样,就能保证每个文件的电导率结果都被成功保存到独立的文本文件中。

Python: 读取文件夹内所有CSV文件并计算电导率

原文地址: https://www.cveoy.top/t/topic/jKs3 著作权归作者所有。请勿转载和采集!

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