Python代码:计算图像分割模型的Accuracy, Precision, Recall和Specificity
def eval_net(net, dataset, slicetotal, batch_size=12, gpu=True):
'Evaluation without the densecrf with the dice coefficient'
net.eval()
start = time.time()
dice_ = torch.zeros(14).cuda()
jac_ = torch.zeros(14).cuda()
NE = torch.zeros(14).cuda()
JNE = torch.zeros(14).cuda()
accuracy_ = torch.zeros(14).cuda()
precision_ = torch.zeros(14).cuda()
recall_ = torch.zeros(14).cuda()
specificity_ = torch.zeros(14).cuda()
print(1)
with torch.no_grad():
for i, b in enumerate(batch(dataset, batch_size)):
imgs = np.array([k[0] for k in b]).astype(np.float32)
true_masks = np.array([k[1] for k in b])
imgs = torch.from_numpy(imgs)
imgs = imgs.unsqueeze(1)
true_masks = torch.from_numpy(true_masks)
pre_masks_eval = torch.zeros(true_masks.shape[0],14,256,256)
true_masks_eval = torch.zeros(true_masks.shape[0],14,256,256)
batchshape = true_masks.shape[0]
batch_dice = torch.zeros(14).cuda()
if gpu:
imgs = imgs.cuda()
true_masks = true_masks.cuda()
net.cuda()
output_img = net(imgs)
input = output_img.cuda()
pre_masks = input.max(1)[1].float() #索引代表像素所属类别的数>字
for ak in range(14):
if ak == 0:
continue
pre_masks_eval[:,ak] = (pre_masks==ak)
true_masks_eval[:,ak] = (true_masks==ak)
premasks = pre_masks_eval[:,ak].view(true_masks.shape[0],-1)
truemasks = true_masks_eval[:,ak].view(true_masks.shape[0],-1)
intersection = premasks * truemasks
TP = intersection.sum(1)
FP = premasks.sum(1) - TP
FN = truemasks.sum(1) - TP
TN = ((premasks == 0) * (truemasks == 0)).sum(1)
for bk in range(true_masks.shape[0]):
if TP[bk] == 0 and FP[bk] == 0 and FN[bk] == 0:
NE[ak] += 1
JNE[ak] += 1
else:
batch_dice[ak] = batch_dice[ak] + 2*TP[bk] / (2*TP[bk] + FP[bk] + FN[bk])
jac_[ak] = jac_[ak] + TP[bk] / (TP[bk] + FP[bk] + FN[bk])
# Compute accuracy
accuracy_[ak] = accuracy_[ak] + (TP[bk] + TN[bk]) / (TP[bk] + TN[bk] + FP[bk] + FN[bk])
# Compute precision
precision_[ak] = precision_[ak] + TP[bk] / (TP[bk] + FP[bk])
# Compute recall
recall_[ak] = recall_[ak] + TP[bk] / (TP[bk] + FN[bk])
# Compute specificity
specificity_[ak] = specificity_[ak] + TN[bk] / (TN[bk] + FP[bk])
dice_ = dice_ + batch_dice
for knum in range(14):
dice_[knum] = dice_[knum] / (slicetotal - NE[knum])
jac_[knum] = jac_[knum] / (slicetotal - JNE[knum])
accuracy_[knum] = accuracy_[knum] / batchshape
precision_[knum] = precision_[knum] / batchshape
recall_[knum] = recall_[knum] / batchshape
specificity_[knum] = specificity_[knum] / batchshape
end = time.time()
print('time used:',end - start)
return dice_,jac_,accuracy_,precision_,recall_,specificity_
原文地址: https://www.cveoy.top/t/topic/fRSX 著作权归作者所有。请勿转载和采集!