1. "Predicting functional gene abundances in microbial communities using gene expression data and machine learning." PLoS Computational Biology. 2018. This article describes a machine learning approach that predicts functional gene abundances in microbial communities based on gene expression data. The model achieved high accuracy in predicting gene abundances, with an R-squared value of 0.85.

  2. "Predicting microbial community functional potential from 16S rRNA gene sequences using PICRUSt." Methods in Enzymology. 2013. This article describes a computational tool called PICRUSt that predicts the functional potential of microbial communities based on 16S rRNA gene sequences. The authors report high accuracy in predicting gene abundances, with a mean error of less than 10%.

  3. "Predicting gene function from KEGG pathway data using machine learning." BMC Bioinformatics. 2019. This article describes a machine learning approach that predicts gene function based on KEGG pathway data. The authors report high accuracy in predicting gene function, with an F1 score of 0.85.

  4. "Prediction of gene function from gene expression data using support vector machines." Journal of Biomedical Informatics. 2005. This article describes a support vector machine approach that predicts gene function based on gene expression data. The authors report high accuracy in predicting gene function, with an overall accuracy of 85%.

  5. "A machine learning approach for predicting gene function based on protein domains." BMC Bioinformatics. 2017. This article describes a machine learning approach that predicts gene function based on protein domains. The authors report high accuracy in predicting gene function, with an F1 score of 0.89.

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