Phylogenetic Analysis, Motif Composition, and Gene Structure of VcWOX Proteins

The figure illustrates the conserved domains and motifs found in VcWOX proteins. Furthermore, it presents the phylogenetic tree of VcWOX proteins, wherein they are categorized into three distinct groups (I-III).

The motif composition of VcARF proteins is represented using various colored boxes. These motifs were identified through the utilization of the Meme program.

The diagram displays the exon/intron structure of VcWOX genes. Exons are depicted as green rectangles, while introns are represented by thin lines. Additionally, the diagram includes yellow rectangles, which signify the upstream and downstream regions (5' UTR and 3' UTR).

Sequence logos are shown for 20 different patterns. The height of the letters within each stack corresponds to the relative frequency. The symbols used in this panel correspond to the colored boxes depicted in panel B.