A Rosetta job submitted on April 18, 2023 at 4:20 AM CST failed to run on node 'comput16'. The error message indicates that the executable, located at '/mnt/hpc/software/apps/rosetta.source.release-314/main/source/bin/rosetta_scripts.linuxgccrelease', could not be accessed or executed. This prevented all 32 processes from starting.

Here's a breakdown of the issue:

  • Error Message: 'mpirun was unable to launch the specified application as it could not access or execute an executable.'
  • Executable Path: '/mnt/hpc/software/apps/rosetta.source.release-314/main/source/bin/rosetta_scripts.linuxgccrelease'
  • Affected Node: 'comput16'
  • Number of Processes Impacted: 32

To troubleshoot this, verify the following:

  1. Executable Exists: Ensure the Rosetta executable file exists at the specified path and is accessible.
  2. Permissions: Check the file permissions of the executable. It should have execute permissions for the user running the job.
  3. Environment Variables: Confirm that all necessary environment variables, including PATH and LD_LIBRARY_PATH, are correctly set to locate the Rosetta executable and its dependencies.
  4. Node Availability: Verify that node 'comput16' is online and accessible.

Addressing these common causes can help resolve the issue and allow your Rosetta job to run successfully.

Rosetta Job Failed on Node comput16: Executable Not Found

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